PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G194400.1.p
Common NamePRUPE_ppa020862mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 324aa    MW: 36121.7 Da    PI: 6.6314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G194400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.5e-14120171155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r++h ++Er+RR+++N+ ++ Lr ++P +   ++++ + a+i   A++++k+L+
  Prupe.6G194400.1.p 120 QRMTHIAVERNRRKQMNDYLAALRAMMPAC---YAQRGDQASIIGGAINFVKELE 171
                         79****************************...*******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.31E-12118175No hitNo description
SuperFamilySSF474592.75E-17119191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.44119170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-15120184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-11120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10125176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    Send to blast
MTLEAVVLQA DRYSYGFKDF HAVGGGGGGS WSHGFGFGED HQEEKVYTDH HMLNNDVGQQ  60
GFNNPSLEAS MLQSVNDFET NSGPAFNRAF SSTEAPAAST GRRKRRRIQN IKNKEDMETQ  120
RMTHIAVERN RRKQMNDYLA ALRAMMPACY AQRGDQASII GGAINFVKEL EQLLQSLEGH  180
RRTEQQHLNL ASIFSSFFTF PQYSTCLNSH GHGVYNSSVH SNELMAEKQS AIADVEVTMV  240
ESHANVKVLM KKQPKQLLKM VLGLHSLGLM ILHVNVTTAD NMILYTFSVK VEDNSQLTSM  300
NEIAADVYEM VGRIQEEAQL LAQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100108GRRKRRRIQ
2102106RKRRR
3103107KRRRI
4120131RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP6894190.0KP689419.1 Prunus pseudocerasus isolate Unigene6324 bHLH transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007208193.10.0hypothetical protein PRUPE_ppa020862mg
TrEMBLM5W6L70.0M5W6L7_PRUPE; Uncharacterized protein
STRINGVIT_07s0191g00240.t011e-111(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.14e-58bHLH family protein